tag:blogger.com,1999:blog-4890093519663715581.post1707361482141380579..comments2023-10-22T08:30:53.073-07:00Comments on Species In Space: Tutorials on Maxent and ENMToolsDan Warrenhttp://www.blogger.com/profile/07528161395964087899noreply@blogger.comBlogger6125tag:blogger.com,1999:blog-4890093519663715581.post-62110304770315213002021-03-04T11:58:16.427-08:002021-03-04T11:58:16.427-08:00Hi,
As mentioned, was it possible for you to repli...Hi,<br />As mentioned, was it possible for you to replicate the demo on ENMTools? Beginner to ENM so always on the look for materials.<br />Regardssuzhttps://www.blogger.com/profile/08317691753130673070noreply@blogger.comtag:blogger.com,1999:blog-4890093519663715581.post-51108435295485849942015-10-23T00:50:50.869-07:002015-10-23T00:50:50.869-07:00Hi Dan!
I've running your interesting piece o...Hi Dan!<br />I've running your interesting piece of code to ecospat (sandbox) fromyour workshop in JCU. I have a couple of questions that I've can't resolve by myself. Very appreciated if you reply me!<br />first, in the data preparation I only am able to include two of my 4 variables in the stack . I have foru environamental variables (same size and number of rows and column)<br />I'm using:<br />dataType(stack[[1]]) <- "FLT4S"<br />dataType(stack[[2]]) <- "FLT4S"<br />stack[stack < -2000] <- NA<br /><br />and then I tried with dataType(stack[[3]]) and 4 to include my other two environmental variables, but is not working. Any commnet about it? is it posible to include the four variables?<br /><br />Second<br />When I'm grabbing environmental data for species points<br />everything is OK, except in the last line:<br />eutropia.background.env <- eutropia.background.env[min.dist < maxdist,]<br /><br />When I run this line, the background.env have originally 99561 obs and 5 variables to 0 observ and five variables, it's mean the data is erasure from the df. Any idea what happen that one.<br />I tried changing maxdis 0.01 to 0.1 or 0.001, but it is not working, but something happenwith the max/min functions<br /><br />Any idea what happened?<br />In advance Thank you very much!!!!<br /><br /><br /><br /><br /><br />rhttps://www.blogger.com/profile/10256779760729378815noreply@blogger.comtag:blogger.com,1999:blog-4890093519663715581.post-770465971743151092015-10-22T00:09:57.784-07:002015-10-22T00:09:57.784-07:00I got it!!
I have a small error with the data file...I got it!!<br />I have a small error with the data file. It was my fault...<br />I'll try to run with my own data now<br />Cheers<br /><br />Ricardorhttps://www.blogger.com/profile/10256779760729378815noreply@blogger.comtag:blogger.com,1999:blog-4890093519663715581.post-61520735993439346702015-10-21T13:04:17.393-07:002015-10-21T13:04:17.393-07:00What error are you getting? Have you set your wor...What error are you getting? Have you set your working directory?Dan Warrenhttps://www.blogger.com/profile/07528161395964087899noreply@blogger.comtag:blogger.com,1999:blog-4890093519663715581.post-45529627690590755742015-10-21T01:38:39.167-07:002015-10-21T01:38:39.167-07:00Hi Dan!
First of all, Thank you very much for this...Hi Dan!<br />First of all, Thank you very much for this blog and for the news! it has ben so interesting for all people that starting to deal with SDM issues. Of course for your interesting paper.<br />I'm trying to deal with your ecospat R script Demo, but I guess that I'm lost.<br />This part of the code not run properly in my PC:<br /><br /><br />#Grabbing environmental data for species points<br />sp.points <- points<br />coordinates(sp.points) <- ~longitude+latitude<br />sp.list <- levels(as.factor(sp.points$Species))<br />sp.env <- extract(stack, sp.points)<br />sp.env <- cbind(points, sp.env)<br />sp.env <- sp.env[complete.cases(sp.env),]<br /><br />Could you support some advice and a little explanantion??<br /><br />Thank so much in advance!<br /><br />Ricardo<br />rhttps://www.blogger.com/profile/10256779760729378815noreply@blogger.comtag:blogger.com,1999:blog-4890093519663715581.post-33994785762815284722015-10-06T22:47:33.046-07:002015-10-06T22:47:33.046-07:00This comment has been removed by the author.Marine R.https://www.blogger.com/profile/17978909121255926257noreply@blogger.com